Correlated Mutation Analysis

Residue-Residue Coevolution Network (RRCN)

B-C. Lee, K. Park, D. Kim, “Analysis of the residue-residue coevolution network and the functionally important residues in proteins”, Proteins, 72(3):863-872 (2008) Full Text

Reduction of normalised coevolutionary pattern similarity (NCPS) scores: CMc and aMIc method

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PostMod

Reference

Inkyung Jung, Akihisa Matsuyama, Minoru Yoshida, and Dongsup Kim. (2010) PostMod: Sequence-based prediction of phosphorylation sites by considering indirect relationships, BMC bioinformatics Full Text


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ImpoHis

Reference

Inkyung Jung and Dongsup Kim. (2010) The effect of histone modifications on gene regulation differs according to biological function, in submission


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Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe

Supplementary page 

Kim DU, Hayles J, Kim D, Wood V, Park HO, Won M, Yoo HS, Duhig T, Nam M, Palmer G, Han S, Jeffery L, Baek ST, Lee H, Shim YS, Lee M, Kim L, Heo KS, Noh EJ, Lee AR, Jang YJ, Chung KS, Choi SJ, Park JY, Park Y, Kim HM, Park SK, Park HJ, Kang EJ, Kim HB, Kang HS, Park HM, Kim K, Song K, Song KB, Nurse P, Hoe KL., “Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe”, Nat Biotech, 28(6):617-23 (2010) Full Text


Reduction of normalised coevolutionary pattern similarity (NCPS) scores: CMc and aMIc method

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